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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015808850.1_cds_XP_016495535.1_9843
CDS Infomation

[gene=LOC107814610] [db_xref=GeneID:107814610] [protein=carboxyl-terminal-processing peptidase 3, chloroplastic-like] [protein_id=XP_016495535.1] [location=join(157304..157645,158085..158166,158284..158414,158747..158833,159047..159125,159650..159738,160055..160087,160264..160383,160489..160575,160687..160836,160964..161071,161226..161471)] [gbkey=CDS]
Sequence

ATGGAAACTTTCTGCTCCAATTTTGATCTTGGATCATCAATCCCCTTTTCAGTCTCCAAA
TCCTTGATTAATCCAACTTCAAAATCATTTTTTTCTTGTAGATTTTCACCCTTAAATCAT
GGTAAAACACCAAGATTTAAAGGGGTTGTTCCACAAGCTTTAAGCAGAAAGGAGCCTATT
GAACAGTTCAAGAAGAATGATTTTCTTGAAAAGAATGAAAATTTGGTGAAATGGGTAGGG
AAAGGATTTGTTGGATTAGCTGCTGCTTTGTCTTTGTGTTGTAATTCTCCAGCTTTGGCT
GAGTCTCTTACTGTTGCATTTCCTGTCTCTCACACACCTGAGGTAAATACAGTTCAGAGG
ACATTAATAGAGGCTTGGGGTTTGATTAGAGAAACTTTCGTAGATCCTACTTTCAACCAT
CAAGATTGGGACTTGAAACTGCAACAAACAATGGTAGAAATGTTTCCCTTGAGGTCAGAA
GATGCTGCTTATAGCAAAGTCAGGGGAATGCTATCTACGCTTGGAGATCCCTATACGCGC
ATTATTAGTCCTAAGGAGTACCAAAGTTTTAGAATAGGAAGTGATGGAAATTTGCAAGGT
GTTGGCCTCTTCGTCAGCGTTGAACCGAACACAGGGCATCTGGTTGTGTTGTCATGTGTG
GAGAATAGCCCAGCTGCACGTGCAGGTATCCGTGAAGGAGATGAACTGCTTGAGATAAAT
GGAGAGAGGCTTGATGGAGTTGACAGTGAAGCAGCAGCTCAAAAACTGAGGGGTCGTGCT
GGTACAATTGTTACTGTCAAAGTTCACAGTGATAACGGGCCAGGAGTATCTGGTTACAAA
GAGGTTAAACTACCTCGCGAAGTGATTAAGCTTTCGCCAATATCCAGTGCCATAATCCCC
CATAAAATGCCTGATGGTCGCCTCTTGAAAACTGGATACGTGAAGTTGTCAAGCTTCTCT
CAGTCTGCTGCTATGGACATGGAAAACACAATTCAGGAGATGGAAACTCAGGGTGTACAG
TCATATATATTAGATCTTCGCAACAATCCTGGAGGTCTGGTTACTGCCGGGCTGGATGTT
GCCCAAATATGGCTAGATGGCGATGAAACGCTTGTGAACACTATAGATAGGGACGGGAAT
ATGTTACCAATTAGCATGGTCGATGGACATGCTGTAACACACGATCCACTAGTCGTCCTT
GTGAATGAAGGGAGTGCAAGTGCTAGTGAGATTCTGGCGGGGGCACTCCATGATAATGGC
CGCGCGATCCTTGTTGGGCACAAGACTTTTGGCAAAGGAAAGATACAGAGTGTAACACAG
TTGCACGACGGATCAGCTCTATTTGTTACAGTGGCCAAGTATTTATCTCCAGCACTTCAC
GACATCGACCAAGTGGGAATAACACCTGATGTTCAGTGTACAGTTGACATGCTTAATTCA
CCCAAAGACACCTTCAAGAACAAGAGCGCGCCCTCATCTTTGGAGGCTGATTCTTGCATC
ATTGTTGCAGAACATGAATTGGATATTCAAAAATCCGAGGGCTCTGCTTCTTGA

Peptide Sequence

PEP ID

XP_016495535.1
PEP Infomation

PREDICTED: carboxyl-terminal-processing peptidase 3, chloroplastic-like [Nicotiana tabacum]
Sequence

METFCSNFDLGSSIPFSVSKSLINPTSKSFFSCRFSPLNHGKTPRFKGVVPQALSRKEPI
EQFKKNDFLEKNENLVKWVGKGFVGLAAALSLCCNSPALAESLTVAFPVSHTPEVNTVQR
TLIEAWGLIRETFVDPTFNHQDWDLKLQQTMVEMFPLRSEDAAYSKVRGMLSTLGDPYTR
IISPKEYQSFRIGSDGNLQGVGLFVSVEPNTGHLVVLSCVENSPAARAGIREGDELLEIN
GERLDGVDSEAAAQKLRGRAGTIVTVKVHSDNGPGVSGYKEVKLPREVIKLSPISSAIIP
HKMPDGRLLKTGYVKLSSFSQSAAMDMENTIQEMETQGVQSYILDLRNNPGGLVTAGLDV
AQIWLDGDETLVNTIDRDGNMLPISMVDGHAVTHDPLVVLVNEGSASASEILAGALHDNG
RAILVGHKTFGKGKIQSVTQLHDGSALFVTVAKYLSPALHDIDQVGITPDVQCTVDMLNS
PKDTFKNKSAPSSLEADSCIIVAEHELDIQKSEGSAS

Transcript Sequence

Gene sequence data has not been registered.